奥野Gメンバーの研究論文が発表されました。

Kanada R, Tokuhisa A, Tsuda K, Okuno Y, Terayama K. “Exploring Successful Parameter Region for Coarse-Grained Simulation of Biomolecules by Bayesian Optimization and Active Learning” Biomolecules. 2020;10(3):482. Available from: https://doi.org/10.3390/biom10030482

奥野Gメンバーの研究論文が発表されました。

Sato N, Kakuta M, Hasegawa T, Yamaguchi R, Uchino E, Kobayashi W, Sawada K, Tamura Y, Tokuda I, Murashita K, Nakaji S, Imoto S, Yanagita M, Okuno Y. “Metagenomic analysis of bacterial species in tongue microbiome of current and never smokers” npj Biofilms Microbiomes [Internet]. 2020;6(1):1–9. Available from: http://dx.doi.org/10.1038/s41522-020-0121-6

Tanaka Y, Tamada Y, Ikeguchi M, Yamashita F, Okuno Y. “System-Based Differential Gene Network Analysis for Characterizing a Sample-Specific Subnetwork”  Biomolecules. 2020;10(2):306. Available from:https://doi.org/10.3390/biom10020306

奥野Gメンバーの研究論文が発表されました。

Ono F, Chiba S, Isaka Y, Matsumoto S, Ma B, Katayama R, Araki M, Okuno Y. “Improvement in predicting drug sensitivity changes associated with protein mutations using a molecular dynamics based alchemical mutation method” Sci Rep [Internet]. 2020;10(1):2161. Available from: https://doi.org/10.1038/s41598-020-58877-9

Kawai R, Chiba S, Okuwaki K, Kanada R, Doi H, Ono M, Mochizuki Y, Okuno Y. “Stabilization Mechanism for a Nonfibrillar Amyloid β Oligomer Based on Formation of a Hydrophobic Core Determined by Dissipative Particle Dynamics” ACS Chem Neurosci. 2020;11:385–394. Available from: https://doi.org/10.1021/acschemneuro.9b00602

Hatae R, Chamoto K, Kim YH, Sonomura K, Taneishi K, Kawaguchi S, Yoshida H, Ozasa H, Sakamori Y, Akrami M, Fagarasan S, Masuda I, Okuno Y, Matsuda F, Hirai T, Honjo T. “Combination of host immune metabolic biomarkers for the PD-1 blockade cancer immunotherapy” JCI Insight. 2020;5(2):e133501. Aveilable from: https://doi.org/10.1172/jci.insight.133501

奥野G(共著)の研究論文が発表されました

Quy,PN., Kanai, M., Fukuyama, K., Kou, T., Kondo, T., Yamamoto, Y., Matsubara, J., Hiroshima, A., Mochizuki, H., Sakuma, T., Kamada, M., Nakatsui, M., Eso, Y., Seno, H., Masui, T., Masui, K., Minamiguchi, S., Matsumoto, S., Muto, M.”Association between preanalytical factors and tumor mutational burden estimated by next-generation sequencing-based multiplex gene panel assay” The Oncologistfirst published June,11, 2019

Ikemura, S., Yasuda, H., Matsumoto, S., Kamada, M., et al.: Molecular dynamics simulation-guided drug sensitivity prediction for lung cancer with rare EGFR mutations. PNAS (Proceedings of the National Academy of Sciences of the United States of America）first published May, 1, 2019.

Shiraishi, A., Okuda, T., Miyasaka, N., Osugi, T., Okuno, Y., Inoue, J., Satake, H. ”Repertoires of G protein-coupled receptors for Ciona-specific neuropeptides” PNAS published ahead of print April 1, 2019.

Ikeda, A., Funakoshi, E., Araki, M., Ma, B., Karuo, Y., Tarui, A., Sato, K., Okuno, Y., Kawai, K., Omote, M. “Structural modification of indomethacin toward selective inhibition of COX-2 with a significant increase in van der Waals contributions” Bioorg. Med. Chem., 7, 1789–1794, 2019.